Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.32□□□□□ -0.12
XCR1P46094 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.32□□□□□ -0.12
XCR1P46094 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
XCR1P46094 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
XCR1P46094 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.32□□□□□ -0.12
XCR1P46094 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.32□□□□□ -0.12
XCR1P46094 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
XCR1P46094 KRT223P-202ENST00000449164 1292 ntBASIC14.32□□□□□ -0.12
XCR1P46094 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.32□□□□□ -0.12
XCR1P46094 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.32□□□□□ -0.12
XCR1P46094 AP000812.2-201ENST00000538934 718 ntBASIC14.32□□□□□ -0.12
XCR1P46094 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.32□□□□□ -0.12
XCR1P46094 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.32□□□□□ -0.12
XCR1P46094 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.32□□□□□ -0.12
XCR1P46094 AC132938.4-201ENST00000623835 848 ntBASIC14.32□□□□□ -0.12
XCR1P46094 COX11-210ENST00000639671 696 ntBASIC14.32□□□□□ -0.12
XCR1P46094 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
XCR1P46094 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
XCR1P46094 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.32□□□□□ -0.12
XCR1P46094 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
XCR1P46094 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
XCR1P46094 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
XCR1P46094 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 AL137783.1-201ENST00000623494 1896 ntBASIC14.31□□□□□ -0.12
XCR1P46094 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 AL161772.1-201ENST00000610494 4412 ntBASIC14.31□□□□□ -0.12
XCR1P46094 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.31□□□□□ -0.12
XCR1P46094 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
XCR1P46094 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.31□□□□□ -0.12
XCR1P46094 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.31□□□□□ -0.12
XCR1P46094 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
XCR1P46094 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.31□□□□□ -0.12
XCR1P46094 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 FAM197Y7-201ENST00000432892 766 ntBASIC14.31□□□□□ -0.12
XCR1P46094 AL590640.2-201ENST00000457038 527 ntBASIC14.31□□□□□ -0.12
XCR1P46094 AC119751.2-201ENST00000504529 210 ntBASIC14.31□□□□□ -0.12
XCR1P46094 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.31□□□□□ -0.12
XCR1P46094 RHOXF1P1-202ENST00000635473 501 ntBASIC14.31□□□□□ -0.12
XCR1P46094 AL603764.1-201ENST00000636452 321 ntBASIC14.31□□□□□ -0.12
XCR1P46094 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.31□□□□□ -0.12
XCR1P46094 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
XCR1P46094 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.31□□□□□ -0.12
XCR1P46094 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.31□□□□□ -0.12
XCR1P46094 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.31□□□□□ -0.12
XCR1P46094 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
XCR1P46094 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XCR1P46094 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 AC007326.2-201ENST00000624224 7579 ntBASIC14.3□□□□□ -0.12
XCR1P46094 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.3□□□□□ -0.12
XCR1P46094 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 MIR600HG-201ENST00000449175 5984 ntBASIC14.3□□□□□ -0.12
XCR1P46094 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
XCR1P46094 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.3□□□□□ -0.12
XCR1P46094 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.3□□□□□ -0.12
XCR1P46094 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 TPM3P8-201ENST00000330554 643 ntBASIC14.3□□□□□ -0.12
XCR1P46094 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
XCR1P46094 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 CNN2P8-201ENST00000421872 913 ntBASIC14.3□□□□□ -0.12
XCR1P46094 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.3□□□□□ -0.12
XCR1P46094 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
XCR1P46094 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.3□□□□□ -0.12
XCR1P46094 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XCR1P46094 RNA5SP486-201ENST00000515961 83 ntBASIC14.3□□□□□ -0.12
XCR1P46094 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.3□□□□□ -0.12
XCR1P46094 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
XCR1P46094 RN7SL48P-201ENST00000579283 293 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms