Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.2■□□□□ 0.5
TM4SF1P30408 AC092580.1-201ENST00000433998 658 ntBASIC18.2■□□□□ 0.5
TM4SF1P30408 AL135901.1-201ENST00000451812 333 ntBASIC18.2■□□□□ 0.5
TM4SF1P30408 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.2■□□□□ 0.5
TM4SF1P30408 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 RN7SL357P-201ENST00000581065 298 ntBASIC18.2■□□□□ 0.5
TM4SF1P30408 AC012073.1-201ENST00000606114 1108 ntBASIC18.2■□□□□ 0.5
TM4SF1P30408 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 AC002044.2-201ENST00000624910 970 ntBASIC18.2■□□□□ 0.5
TM4SF1P30408 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF1P30408 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 TMBIM7P-203ENST00000641617 1718 ntBASIC18.2■□□□□ 0.5
TM4SF1P30408 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF1P30408 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.2■□□□□ 0.5
TM4SF1P30408 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF1P30408 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF1P30408 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TM4SF1P30408 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TM4SF1P30408 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF1P30408 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF1P30408 AL136172.1-201ENST00000598590 1394 ntBASIC18.19■□□□□ 0.5
TM4SF1P30408 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 AC021305.1-201ENST00000520656 1514 ntBASIC18.19■□□□□ 0.5
TM4SF1P30408 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF1P30408 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF1P30408 OR8T1P-201ENST00000421347 918 ntBASIC18.19■□□□□ 0.5
TM4SF1P30408 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.19■□□□□ 0.5
TM4SF1P30408 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF1P30408 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF1P30408 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF1P30408 AC011471.3-201ENST00000623576 402 ntBASIC18.19■□□□□ 0.5
TM4SF1P30408 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TM4SF1P30408 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF1P30408 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.19■□□□□ 0.5
TM4SF1P30408 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF1P30408 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.19■□□□□ 0.5
TM4SF1P30408 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TM4SF1P30408 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 AC006372.4-201ENST00000624122 1543 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF1P30408 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF1P30408 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 RN7SKP109-201ENST00000410592 316 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 AC093826.1-201ENST00000508655 993 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 AC012158.2-201ENST00000536546 354 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 RN7SL665P-201ENST00000578793 300 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 AP001527.2-201ENST00000614441 631 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF1P30408 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.18■□□□□ 0.5
TM4SF1P30408 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF1P30408 AC092135.3-201ENST00000624151 1846 ntBASIC18.18■□□□□ 0.5
TM4SF1P30408 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms