Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.98□□□□□ -0.17
PRKCAP17252 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.98□□□□□ -0.17
PRKCAP17252 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PRKCAP17252 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PRKCAP17252 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
PRKCAP17252 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PRKCAP17252 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.98□□□□□ -0.17
PRKCAP17252 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.98□□□□□ -0.17
PRKCAP17252 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PRKCAP17252 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.98□□□□□ -0.17
PRKCAP17252 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRKCAP17252 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PRKCAP17252 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PRKCAP17252 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
PRKCAP17252 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
PRKCAP17252 AC004066.1-201ENST00000502488 802 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.97□□□□□ -0.17
PRKCAP17252 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.97□□□□□ -0.17
PRKCAP17252 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.97□□□□□ -0.17
PRKCAP17252 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.97□□□□□ -0.17
PRKCAP17252 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 WASH4P-201ENST00000564273 1246 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 AC124283.3-201ENST00000570869 594 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.97□□□□□ -0.17
PRKCAP17252 MIR3197-201ENST00000582241 73 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 CTBP2P3-201ENST00000585629 1255 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.97□□□□□ -0.17
PRKCAP17252 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 AC093813.1-201ENST00000605066 256 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 AC067750.1-201ENST00000608826 6545 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 AL138799.1-201ENST00000448213 1675 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.97□□□□□ -0.17
PRKCAP17252 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 AC005562.1-201ENST00000583030 3219 ntBASIC13.97□□□□□ -0.17
PRKCAP17252 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.97□□□□□ -0.17
PRKCAP17252 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PRKCAP17252 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PRKCAP17252 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.96□□□□□ -0.17
PRKCAP17252 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PRKCAP17252 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PRKCAP17252 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PRKCAP17252 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms