Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.31□□□□□ -0.44
DFFBO76075 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.31□□□□□ -0.44
DFFBO76075 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.31□□□□□ -0.44
DFFBO76075 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.31□□□□□ -0.44
DFFBO76075 SPCS2P4-201ENST00000436160 681 ntBASIC12.31□□□□□ -0.44
DFFBO76075 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 AL592309.1-201ENST00000443127 649 ntBASIC12.31□□□□□ -0.44
DFFBO76075 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.31□□□□□ -0.44
DFFBO76075 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.31□□□□□ -0.44
DFFBO76075 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.31□□□□□ -0.44
DFFBO76075 AC010327.4-202ENST00000591484 748 ntBASIC12.31□□□□□ -0.44
DFFBO76075 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.31□□□□□ -0.44
DFFBO76075 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
DFFBO76075 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.31□□□□□ -0.44
DFFBO76075 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
DFFBO76075 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.31□□□□□ -0.44
DFFBO76075 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
DFFBO76075 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
DFFBO76075 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
DFFBO76075 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DFFBO76075 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 UPF3AP3-201ENST00000420996 769 ntBASIC12.3□□□□□ -0.44
DFFBO76075 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.3□□□□□ -0.44
DFFBO76075 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.3□□□□□ -0.44
DFFBO76075 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.3□□□□□ -0.44
DFFBO76075 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.3□□□□□ -0.44
DFFBO76075 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
DFFBO76075 MIR4469-201ENST00000583919 79 ntBASIC12.3□□□□□ -0.44
DFFBO76075 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
DFFBO76075 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
DFFBO76075 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DFFBO76075 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms