Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 RNA5SP359-201ENST00000364838 113 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 KRT18P36-201ENST00000411618 1276 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 BANF1P3-201ENST00000412556 261 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 TSPY25P-201ENST00000429463 745 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 RPSAP15-201ENST00000448168 861 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 CHCHD2P9-201ENST00000461726 456 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 AC020658.6-201ENST00000623564 1870 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 PAUPAR-201ENST00000630360 2965 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 TMBIM7P-202ENST00000641474 1516 ntBASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.48■□□□□ 0.07
HCFC2Q9Y5Z7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC112693.3-201ENST00000624819 1983 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AL807761.2-201ENST00000422849 729 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC097065.1-201ENST00000425737 517 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 KRT18P66-201ENST00000452970 1269 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 RPL18AP3-201ENST00000462885 528 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC007326.1-201ENST00000604539 458 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC087392.5-201ENST00000612517 489 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 AC136621.1-201ENST00000624017 2304 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 C18orf15-201ENST00000623680 2534 ntBASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC2Q9Y5Z7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms