Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 FDX1P1-201ENST00000449115 551 ntBASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC009093.7-201ENST00000623853 1223 ntBASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC090505.1-201ENST00000430515 1834 ntBASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AL137783.1-201ENST00000623494 1896 ntBASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 RPL37AP1-201ENST00000412502 279 ntBASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 PGAM5P1-201ENST00000518923 814 ntBASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 AC005829.1-201ENST00000570002 483 ntBASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms