Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC007787.1-201ENST00000588095 1583 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC097359.2-201ENST00000604992 2389 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC093525.8-201ENST00000624099 1342 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 AC124283.3-201ENST00000570869 594 ntBASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 KRT8P22-201ENST00000562317 1415 ntBASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC4Q9Y296 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 MST1P2-201ENST00000457982 2291 ntBASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 ACE3P-201ENST00000423435 1973 ntBASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 COL6A4P2-202ENST00000504443 2753 ntBASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC4Q9Y296 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms