Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGB4Q9UN71 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGB4Q9UN71 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC018529.2-202ENST00000611482 3087 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC074338.1-201ENST00000416825 156 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 CNN2P2-201ENST00000443536 909 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 CNN2P3-201ENST00000450201 906 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 KRT18P43-201ENST00000469825 1281 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AL596442.2-201ENST00000610240 980 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AL136317.3-201ENST00000618497 906 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AL645728.2-202ENST00000641679 227 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC079781.4-201ENST00000641908 219 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC131212.3-201ENST00000624087 4219 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 AC113367.3-201ENST00000508316 1912 ntBASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDHGB4Q9UN71 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC012508.2-201ENST00000567613 1472 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC011474.4-201ENST00000623523 2076 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 MIR1233-2-201ENST00000408138 82 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 MIR1233-1-201ENST00000408722 82 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC004967.1-201ENST00000453589 447 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 HLA-J-203ENST00000494367 1087 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 SDHAP3-202ENST00000515467 728 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC025678.2-201ENST00000562061 970 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC074044.1-201ENST00000609673 707 ntBASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGB4Q9UN71 AC134684.3-201ENST00000641758 218 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms