Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 AC023090.2-201ENST00000625182 2110 ntBASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 MIR346-201ENST00000362234 95 ntBASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 IGHV3-62-201ENST00000520057 340 ntBASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 AL662844.1-201ENST00000546340 181 ntBASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 DGCR9-201ENST00000609630 2415 ntBASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 AC007787.1-201ENST00000588095 1583 ntBASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC10.11□□□□□ -0.79
SND1-IT1Q9HBX3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms