Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC004967.1-201ENST00000453589 447 ntBASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 GAPDHP40-201ENST00000505218 1006 ntBASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 SPDYE18-201ENST00000510091 1050 ntBASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 BEND3P1-201ENST00000421591 1944 ntBASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 MST1P2-201ENST00000457982 2291 ntBASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 TREML5P-201ENST00000421694 576 ntBASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 AC107890.1-201ENST00000422478 521 ntBASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 DNAJB3-202ENST00000449667 1266 ntBASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms