Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.58
VGLL1Q99990 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
VGLL1Q99990 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
VGLL1Q99990 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
VGLL1Q99990 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
VGLL1Q99990 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 COL6A4P2-202ENST00000504443 2753 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.45□□□□□ -0.58
VGLL1Q99990 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.45□□□□□ -0.58
VGLL1Q99990 AC015802.1-201ENST00000588104 1449 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 AL157414.3-201ENST00000624276 1954 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
VGLL1Q99990 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.45□□□□□ -0.58
VGLL1Q99990 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.45□□□□□ -0.58
VGLL1Q99990 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 RN7SL618P-201ENST00000477850 296 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.45□□□□□ -0.58
VGLL1Q99990 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.45□□□□□ -0.58
VGLL1Q99990 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 AL512356.2-201ENST00000546955 174 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.45□□□□□ -0.58
VGLL1Q99990 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.45□□□□□ -0.58
VGLL1Q99990 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 AC051619.7-201ENST00000568314 623 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
VGLL1Q99990 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
VGLL1Q99990 TEX28P1-201ENST00000613479 1221 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 TEX28P2-201ENST00000617764 1221 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 SPDYE12P-201ENST00000618416 771 ntBASIC11.45□□□□□ -0.58
VGLL1Q99990 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.45□□□□□ -0.58
VGLL1Q99990 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.45□□□□□ -0.58
VGLL1Q99990 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
VGLL1Q99990 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.45□□□□□ -0.58
VGLL1Q99990 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
VGLL1Q99990 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VGLL1Q99990 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.45□□□□□ -0.58
VGLL1Q99990 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 AL360270.3-201ENST00000609118 1348 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms