Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 AL590627.1-203ENST00000421194 1026 ntBASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 MKNK2P1-201ENST00000437526 628 ntBASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 AL033527.5-202ENST00000641632 1098 ntBASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 KRT8P24-201ENST00000560290 1559 ntBASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 AC090505.1-201ENST00000430515 1834 ntBASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 LINC01115-203ENST00000606068 577 ntBASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NSMCE2Q96MF7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NSMCE2Q96MF7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms