Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 C18orf15-201ENST00000623680 2534 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AC055811.4-201ENST00000624039 1754 ntBASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 SSR4P1-203ENST00000599569 2260 ntBASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AL603764.1-201ENST00000636452 321 ntBASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM48Q8IWZ4 AC138035.3-201ENST00000622706 2791 ntBASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 BRWD1P1-201ENST00000401091 371 ntBASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 MIR1202-201ENST00000408529 83 ntBASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 AC245100.3-201ENST00000441281 285 ntBASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 RNA5SP412-201ENST00000516234 123 ntBASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 FAM45BP-202ENST00000592932 1624 ntBASIC14.79□□□□□ -0.04
TRIM48Q8IWZ4 REXO1L4P-201ENST00000605109 1937 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms