Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.98□□□□□ -0.01
NUDCD3Q8IVD9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUDCD3Q8IVD9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.98□□□□□ -0.01
NUDCD3Q8IVD9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NUDCD3Q8IVD9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUDCD3Q8IVD9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUDCD3Q8IVD9 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NUDCD3Q8IVD9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AC131212.3-201ENST00000624087 4219 ntBASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.97□□□□□ -0.01
NUDCD3Q8IVD9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 CICP17-201ENST00000418553 2377 ntBASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 PGAM5P1-201ENST00000518923 814 ntBASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 KRT8P22-201ENST00000562317 1415 ntBASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms