Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 AC010336.2-201ENST00000564226 506 ntBASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 AC005829.1-201ENST00000570002 483 ntBASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 AC012617.1-204ENST00000586340 2305 ntBASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 KRT8P14-201ENST00000414254 1442 ntBASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 YBX1P5-201ENST00000509441 847 ntBASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 AC051619.7-201ENST00000568314 623 ntBASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 AP001059.3-201ENST00000619053 235 ntBASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 AL109936.8-201ENST00000641772 604 ntBASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRTM1Q86UE6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms