Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 RPL35P9-201ENST00000446059 350 ntBASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 NAV1-210ENST00000593583 726 ntBASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CTBP2P8-201ENST00000422584 1330 ntBASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC026691.1-201ENST00000602502 2017 ntBASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC026470.1-201ENST00000478038 846 ntBASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC023906.1-201ENST00000486386 453 ntBASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC138701.2-201ENST00000553634 226 ntBASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC138696.2-201ENST00000607376 223 ntBASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC020910.5-201ENST00000623668 1865 ntBASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO4Q2I0M5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms