Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDH1Q08174 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.49□□□□□ -0.09
PCDH1Q08174 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.49□□□□□ -0.09
PCDH1Q08174 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDH1Q08174 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDH1Q08174 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.49□□□□□ -0.09
PCDH1Q08174 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDH1Q08174 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 LRRC59-203ENST00000576448 1531 ntBASIC14.49□□□□□ -0.09
PCDH1Q08174 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDH1Q08174 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDH1Q08174 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDH1Q08174 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
PCDH1Q08174 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH1Q08174 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH1Q08174 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDH1Q08174 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 AC098614.1-201ENST00000368528 745 ntBASIC14.48□□□□□ -0.09
PCDH1Q08174 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH1Q08174 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PCDH1Q08174 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDH1Q08174 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 MESTP3-201ENST00000503460 968 ntBASIC14.48□□□□□ -0.09
PCDH1Q08174 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.48□□□□□ -0.09
PCDH1Q08174 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PCDH1Q08174 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH1Q08174 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDH1Q08174 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH1Q08174 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH1Q08174 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH1Q08174 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDH1Q08174 AC007969.1-201ENST00000433675 447 ntBASIC14.47□□□□□ -0.09
PCDH1Q08174 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
PCDH1Q08174 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDH1Q08174 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 AC131206.1-201ENST00000538078 1211 ntBASIC14.47□□□□□ -0.09
PCDH1Q08174 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDH1Q08174 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 RN7SL48P-201ENST00000579283 293 ntBASIC14.47□□□□□ -0.09
PCDH1Q08174 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDH1Q08174 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDH1Q08174 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH1Q08174 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCDH1Q08174 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms