Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.89□□□□□ -0.19
SMIM11AP58511 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.89□□□□□ -0.19
SMIM11AP58511 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.89□□□□□ -0.19
SMIM11AP58511 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SMIM11AP58511 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11AP58511 AL137783.1-201ENST00000623494 1896 ntBASIC13.89□□□□□ -0.19
SMIM11AP58511 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 AC005840.4-201ENST00000541242 2494 ntBASIC13.88□□□□□ -0.19
SMIM11AP58511 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMIM11AP58511 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SMIM11AP58511 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM11AP58511 UPF3AP3-201ENST00000420996 769 ntBASIC13.88□□□□□ -0.19
SMIM11AP58511 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
SMIM11AP58511 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM11AP58511 MEIS3P1-201ENST00000495167 958 ntBASIC13.88□□□□□ -0.19
SMIM11AP58511 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM11AP58511 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.88□□□□□ -0.19
SMIM11AP58511 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMIM11AP58511 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SMIM11AP58511 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
SMIM11AP58511 AL596442.2-201ENST00000610240 980 ntBASIC13.88□□□□□ -0.19
SMIM11AP58511 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM11AP58511 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM11AP58511 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM11AP58511 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM11AP58511 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.88□□□□□ -0.19
SMIM11AP58511 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM11AP58511 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SMIM11AP58511 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM11AP58511 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMIM11AP58511 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM11AP58511 AC023090.2-201ENST00000625182 2110 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM11AP58511 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM11AP58511 RPSAP43-201ENST00000402237 625 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.87□□□□□ -0.19
SMIM11AP58511 CNN2P11-201ENST00000429351 262 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 HLA-K-203ENST00000430151 1046 ntBASIC13.87□□□□□ -0.19
SMIM11AP58511 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms