Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CBX5P45973 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CBX5P45973 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.03□□□□□ -0.32
CBX5P45973 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 AL662844.1-201ENST00000546340 181 ntBASIC13.03□□□□□ -0.32
CBX5P45973 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CBX5P45973 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.03□□□□□ -0.32
CBX5P45973 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 AC015910.1-201ENST00000579400 975 ntBASIC13.03□□□□□ -0.32
CBX5P45973 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.03□□□□□ -0.32
CBX5P45973 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.03□□□□□ -0.32
CBX5P45973 AL691432.3-201ENST00000621860 400 ntBASIC13.03□□□□□ -0.32
CBX5P45973 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 AC092135.3-201ENST00000624151 1846 ntBASIC13.03□□□□□ -0.32
CBX5P45973 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CBX5P45973 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.03□□□□□ -0.32
CBX5P45973 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CBX5P45973 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.03□□□□□ -0.32
CBX5P45973 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.03□□□□□ -0.32
CBX5P45973 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.03□□□□□ -0.32
CBX5P45973 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CBX5P45973 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CBX5P45973 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CBX5P45973 AP3S2-216ENST00000617003 1561 ntBASIC13.03□□□□□ -0.32
CBX5P45973 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CBX5P45973 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CBX5P45973 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CBX5P45973 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CBX5P45973 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CBX5P45973 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.02□□□□□ -0.32
CBX5P45973 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CBX5P45973 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CBX5P45973 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.02□□□□□ -0.32
CBX5P45973 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.02□□□□□ -0.32
CBX5P45973 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.02□□□□□ -0.32
CBX5P45973 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CBX5P45973 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CBX5P45973 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CBX5P45973 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.02□□□□□ -0.33
CBX5P45973 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 AL353705.2-201ENST00000428243 662 ntBASIC13.02□□□□□ -0.33
CBX5P45973 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 KRT18P2-201ENST00000447938 1258 ntBASIC13.02□□□□□ -0.33
CBX5P45973 SPDYE11-202ENST00000450699 704 ntBASIC13.02□□□□□ -0.33
CBX5P45973 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CBX5P45973 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 KRT18P56-201ENST00000507275 550 ntBASIC13.02□□□□□ -0.33
CBX5P45973 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.02□□□□□ -0.33
CBX5P45973 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CBX5P45973 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.02□□□□□ -0.33
CBX5P45973 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.02□□□□□ -0.33
CBX5P45973 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.02□□□□□ -0.33
CBX5P45973 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.02□□□□□ -0.33
CBX5P45973 SPDYE9P-201ENST00000570642 692 ntBASIC13.02□□□□□ -0.33
CBX5P45973 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.02□□□□□ -0.33
CBX5P45973 SPDYE10P-202ENST00000612005 668 ntBASIC13.02□□□□□ -0.33
CBX5P45973 SPDYE8P-202ENST00000612377 668 ntBASIC13.02□□□□□ -0.33
CBX5P45973 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.02□□□□□ -0.33
CBX5P45973 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.02□□□□□ -0.33
CBX5P45973 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.02□□□□□ -0.33
CBX5P45973 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CBX5P45973 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms