Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 DMBT1P1-203ENST00000636837 4628 ntBASIC15.11■□□□□ 0.01
LSP1P33241 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 AC004899.2-201ENST00000622993 3860 ntBASIC15.11■□□□□ 0.01
LSP1P33241 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
LSP1P33241 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LSP1P33241 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LSP1P33241 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LSP1P33241 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.1■□□□□ 0.01
LSP1P33241 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.1■□□□□ 0.01
LSP1P33241 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.1■□□□□ 0.01
LSP1P33241 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 AC093909.1-201ENST00000504731 1122 ntBASIC15.1■□□□□ 0.01
LSP1P33241 AL662844.1-201ENST00000546340 181 ntBASIC15.1■□□□□ 0.01
LSP1P33241 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.1■□□□□ 0.01
LSP1P33241 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.1■□□□□ 0.01
LSP1P33241 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.1■□□□□ 0.01
LSP1P33241 AL031008.1-201ENST00000619963 541 ntBASIC15.1■□□□□ 0.01
LSP1P33241 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LSP1P33241 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.1■□□□□ 0.01
LSP1P33241 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LSP1P33241 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.1■□□□□ 0.01
LSP1P33241 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSP1P33241 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.1■□□□□ 0.01
LSP1P33241 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.09■□□□□ 0.01
LSP1P33241 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.09■□□□□ 0.01
LSP1P33241 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LSP1P33241 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LSP1P33241 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.09■□□□□ 0.01
LSP1P33241 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LSP1P33241 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 AC142381.1-201ENST00000426099 345 ntBASIC15.09■□□□□ 0.01
LSP1P33241 FAM197Y8-203ENST00000450145 560 ntBASIC15.09■□□□□ 0.01
LSP1P33241 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.09■□□□□ 0.01
LSP1P33241 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.09■□□□□ 0.01
LSP1P33241 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.09■□□□□ 0.01
LSP1P33241 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.09■□□□□ 0.01
LSP1P33241 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LSP1P33241 AC117500.6-201ENST00000624871 588 ntBASIC15.09■□□□□ 0.01
LSP1P33241 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.09■□□□□ 0.01
LSP1P33241 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LSP1P33241 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LSP1P33241 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSP1P33241 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.09■□□□□ 0.01
LSP1P33241 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms