Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL022328.1-201ENST00000610050 478 ntBASIC15.73■□□□□ 0.11
MMP8P22894 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP8P22894 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP8P22894 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
MMP8P22894 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP8P22894 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
MMP8P22894 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.72■□□□□ 0.11
MMP8P22894 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
MMP8P22894 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP8P22894 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.72■□□□□ 0.11
MMP8P22894 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MMP8P22894 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.72■□□□□ 0.11
MMP8P22894 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP8P22894 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.72■□□□□ 0.11
MMP8P22894 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MMP8P22894 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP8P22894 ECM1P1-201ENST00000604092 1279 ntBASIC15.72■□□□□ 0.11
MMP8P22894 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.72■□□□□ 0.11
MMP8P22894 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP8P22894 BX088702.1-201ENST00000610784 235 ntBASIC15.72■□□□□ 0.11
MMP8P22894 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
MMP8P22894 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MMP8P22894 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP8P22894 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP8P22894 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
MMP8P22894 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MMP8P22894 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP8P22894 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP8P22894 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP8P22894 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MMP8P22894 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
MMP8P22894 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP8P22894 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP8P22894 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP8P22894 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP8P22894 C2orf27AP3-201ENST00000434123 579 ntBASIC15.71■□□□□ 0.11
MMP8P22894 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP8P22894 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MMP8P22894 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP8P22894 AC106820.3-201ENST00000561653 397 ntBASIC15.71■□□□□ 0.11
MMP8P22894 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP8P22894 AL354718.3-201ENST00000616414 581 ntBASIC15.71■□□□□ 0.11
MMP8P22894 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.71■□□□□ 0.11
MMP8P22894 AP001002.3-201ENST00000623482 206 ntBASIC15.71■□□□□ 0.11
MMP8P22894 CR382287.1-201ENST00000623954 586 ntBASIC15.71■□□□□ 0.11
MMP8P22894 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP8P22894 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP8P22894 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP8P22894 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms