Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.37■□□□□ 0.21
RFX1P22670 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.37■□□□□ 0.21
RFX1P22670 SOCS2P1-201ENST00000417727 557 ntBASIC16.37■□□□□ 0.21
RFX1P22670 AC134915.1-201ENST00000426461 574 ntBASIC16.37■□□□□ 0.21
RFX1P22670 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 AC079316.1-201ENST00000548397 411 ntBASIC16.37■□□□□ 0.21
RFX1P22670 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.37■□□□□ 0.21
RFX1P22670 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.37■□□□□ 0.21
RFX1P22670 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.37■□□□□ 0.21
RFX1P22670 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RFX1P22670 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.37■□□□□ 0.21
RFX1P22670 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX1P22670 AC140479.7-201ENST00000636301 2332 ntBASIC16.36■□□□□ 0.21
RFX1P22670 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX1P22670 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.36■□□□□ 0.21
RFX1P22670 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 AC007551.1-201ENST00000457394 519 ntBASIC16.36■□□□□ 0.21
RFX1P22670 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.36■□□□□ 0.21
RFX1P22670 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.36■□□□□ 0.21
RFX1P22670 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX1P22670 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RFX1P22670 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX1P22670 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX1P22670 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX1P22670 KRT8P14-201ENST00000414254 1442 ntBASIC16.36■□□□□ 0.21
RFX1P22670 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX1P22670 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RFX1P22670 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX1P22670 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.35■□□□□ 0.21
RFX1P22670 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 AL139094.1-201ENST00000405549 1188 ntBASIC16.35■□□□□ 0.21
RFX1P22670 MIR1247-201ENST00000408206 136 ntBASIC16.35■□□□□ 0.21
RFX1P22670 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX1P22670 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX1P22670 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms