Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.76□□□□□ -0.53
CD28P10747 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 AC105250.1-201ENST00000509378 2057 ntBASIC11.76□□□□□ -0.53
CD28P10747 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CD28P10747 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 AC004945.1-201ENST00000416738 983 ntBASIC11.76□□□□□ -0.53
CD28P10747 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.76□□□□□ -0.53
CD28P10747 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC11.76□□□□□ -0.53
CD28P10747 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.76□□□□□ -0.53
CD28P10747 HIST2H2BB-201ENST00000449108 381 ntBASIC11.76□□□□□ -0.53
CD28P10747 AC005077.2-201ENST00000449786 690 ntBASIC11.76□□□□□ -0.53
CD28P10747 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.76□□□□□ -0.53
CD28P10747 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.76□□□□□ -0.53
CD28P10747 FTLP10-202ENST00000505798 471 ntBASIC11.76□□□□□ -0.53
CD28P10747 AC126915.1-201ENST00000522847 1038 ntBASIC11.76□□□□□ -0.53
CD28P10747 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.76□□□□□ -0.53
CD28P10747 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.76□□□□□ -0.53
CD28P10747 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 AC138466.3-201ENST00000619983 221 ntBASIC11.76□□□□□ -0.53
CD28P10747 AP001002.3-201ENST00000623482 206 ntBASIC11.76□□□□□ -0.53
CD28P10747 AL603764.1-201ENST00000636452 321 ntBASIC11.76□□□□□ -0.53
CD28P10747 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 MST1L-201ENST00000442552 2185 ntBASIC11.76□□□□□ -0.53
CD28P10747 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC11.76□□□□□ -0.53
CD28P10747 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.76□□□□□ -0.53
CD28P10747 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.75□□□□□ -0.53
CD28P10747 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.75□□□□□ -0.53
CD28P10747 AC104640.1-201ENST00000562617 2109 ntBASIC11.75□□□□□ -0.53
CD28P10747 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CD28P10747 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CD28P10747 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.75□□□□□ -0.53
CD28P10747 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
CD28P10747 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.75□□□□□ -0.53
CD28P10747 HIST2H2BC-201ENST00000498492 580 ntBASIC11.75□□□□□ -0.53
CD28P10747 AC026434.2-201ENST00000506094 1078 ntBASIC11.75□□□□□ -0.53
CD28P10747 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC11.75□□□□□ -0.53
CD28P10747 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.75□□□□□ -0.53
CD28P10747 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC11.75□□□□□ -0.53
CD28P10747 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.75□□□□□ -0.53
CD28P10747 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.75□□□□□ -0.53
CD28P10747 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.75□□□□□ -0.53
CD28P10747 PPA1-206ENST00000625364 644 ntTSL 5 BASIC11.75□□□□□ -0.53
CD28P10747 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD28P10747 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms