Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.86□□□□□ -0.03
CAPN1P07384 AL442647.2-201ENST00000429864 857 ntBASIC14.86□□□□□ -0.03
CAPN1P07384 FAM86LP-201ENST00000478302 853 ntBASIC14.86□□□□□ -0.03
CAPN1P07384 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CAPN1P07384 RAB43P1-201ENST00000561790 589 ntBASIC14.86□□□□□ -0.03
CAPN1P07384 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.86□□□□□ -0.03
CAPN1P07384 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.86□□□□□ -0.03
CAPN1P07384 AC008735.3-201ENST00000596646 500 ntBASIC14.86□□□□□ -0.03
CAPN1P07384 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 AC017083.2-201ENST00000608069 979 ntBASIC14.86□□□□□ -0.03
CAPN1P07384 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CAPN1P07384 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CAPN1P07384 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CAPN1P07384 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.85□□□□□ -0.03
CAPN1P07384 MTHFR-210ENST00000641407 2387 ntBASIC14.85□□□□□ -0.03
CAPN1P07384 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CAPN1P07384 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.85□□□□□ -0.03
CAPN1P07384 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.85□□□□□ -0.03
CAPN1P07384 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.85□□□□□ -0.03
CAPN1P07384 SAMD11P1-201ENST00000571429 661 ntBASIC14.85□□□□□ -0.03
CAPN1P07384 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 AC010319.3-201ENST00000597028 470 ntBASIC14.85□□□□□ -0.03
CAPN1P07384 AL512343.1-201ENST00000605837 169 ntBASIC14.85□□□□□ -0.03
CAPN1P07384 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.85□□□□□ -0.03
CAPN1P07384 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 AC007787.1-201ENST00000588095 1583 ntBASIC14.85□□□□□ -0.03
CAPN1P07384 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CAPN1P07384 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CAPN1P07384 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.85□□□□□ -0.03
CAPN1P07384 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CAPN1P07384 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CAPN1P07384 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.84□□□□□ -0.03
CAPN1P07384 MIR1909-201ENST00000411312 80 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms