Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.51□□□□□ -0.41
CTSDP07339 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.51□□□□□ -0.41
CTSDP07339 MCCD1P2-201ENST00000423228 335 ntBASIC12.51□□□□□ -0.41
CTSDP07339 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CTSDP07339 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.51□□□□□ -0.41
CTSDP07339 AC026150.2-201ENST00000564693 1156 ntBASIC12.51□□□□□ -0.41
CTSDP07339 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.51□□□□□ -0.41
CTSDP07339 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.51□□□□□ -0.41
CTSDP07339 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.51□□□□□ -0.41
CTSDP07339 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CTSDP07339 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CTSDP07339 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.5□□□□□ -0.41
CTSDP07339 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTSDP07339 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.5□□□□□ -0.41
CTSDP07339 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CTSDP07339 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTSDP07339 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTSDP07339 KRT18P32-201ENST00000424695 1287 ntBASIC12.5□□□□□ -0.41
CTSDP07339 AC005237.2-201ENST00000434368 219 ntBASIC12.5□□□□□ -0.41
CTSDP07339 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.5□□□□□ -0.41
CTSDP07339 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.5□□□□□ -0.41
CTSDP07339 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
CTSDP07339 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CTSDP07339 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.5□□□□□ -0.41
CTSDP07339 AC000095.1-201ENST00000603208 874 ntBASIC12.5□□□□□ -0.41
CTSDP07339 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.5□□□□□ -0.41
CTSDP07339 AL033527.5-202ENST00000641632 1098 ntBASIC12.5□□□□□ -0.41
CTSDP07339 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTSDP07339 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CTSDP07339 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.5□□□□□ -0.41
CTSDP07339 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.5□□□□□ -0.41
CTSDP07339 PPT1-213ENST00000641319 2388 ntBASIC12.5□□□□□ -0.41
CTSDP07339 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.5□□□□□ -0.41
CTSDP07339 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.5□□□□□ -0.41
CTSDP07339 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTSDP07339 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTSDP07339 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTSDP07339 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 CICP8-201ENST00000455800 2813 ntBASIC12.49□□□□□ -0.41
CTSDP07339 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms