Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
COL5A2P05997 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COL5A2P05997 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
COL5A2P05997 PRORSD1P-202ENST00000563365 2154 ntBASIC19.18■□□□□ 0.66
COL5A2P05997 LINC00528-201ENST00000600723 2160 ntBASIC19.18■□□□□ 0.66
COL5A2P05997 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COL5A2P05997 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.17■□□□□ 0.66
COL5A2P05997 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 AC026691.1-201ENST00000602502 2017 ntBASIC19.17■□□□□ 0.66
COL5A2P05997 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COL5A2P05997 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC19.17■□□□□ 0.66
COL5A2P05997 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 PPP1R2P4-201ENST00000424051 595 ntBASIC19.17■□□□□ 0.66
COL5A2P05997 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.17■□□□□ 0.66
COL5A2P05997 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC19.17■□□□□ 0.66
COL5A2P05997 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.17■□□□□ 0.66
COL5A2P05997 LINC00244-201ENST00000625073 613 ntBASIC19.17■□□□□ 0.66
COL5A2P05997 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.17■□□□□ 0.66
COL5A2P05997 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COL5A2P05997 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.17■□□□□ 0.66
COL5A2P05997 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL5A2P05997 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.17■□□□□ 0.66
COL5A2P05997 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.17■□□□□ 0.66
COL5A2P05997 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.17■□□□□ 0.66
COL5A2P05997 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL5A2P05997 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.16■□□□□ 0.66
COL5A2P05997 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL5A2P05997 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.16■□□□□ 0.66
COL5A2P05997 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC19.16■□□□□ 0.66
COL5A2P05997 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.16■□□□□ 0.66
COL5A2P05997 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 AC006483.2-201ENST00000609813 515 ntBASIC19.16■□□□□ 0.66
COL5A2P05997 AC018695.6-201ENST00000614011 534 ntBASIC19.16■□□□□ 0.66
COL5A2P05997 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 AL591122.2-201ENST00000624125 1853 ntBASIC19.16■□□□□ 0.66
COL5A2P05997 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 LTB4R2-202ENST00000528054 3092 ntBASIC19.16■□□□□ 0.66
COL5A2P05997 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC19.16■□□□□ 0.66
COL5A2P05997 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL5A2P05997 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
COL5A2P05997 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 SURF4-203ENST00000371991 715 ntTSL 3 BASIC19.16■□□□□ 0.66
COL5A2P05997 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.16■□□□□ 0.66
COL5A2P05997 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.16■□□□□ 0.66
COL5A2P05997 AC010632.2-201ENST00000588369 1224 ntBASIC19.16■□□□□ 0.66
COL5A2P05997 AP005264.6-204ENST00000588436 719 ntBASIC19.16■□□□□ 0.66
COL5A2P05997 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.16■□□□□ 0.66
COL5A2P05997 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL5A2P05997 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC19.16■□□□□ 0.66
COL5A2P05997 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL5A2P05997 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.15■□□□□ 0.66
COL5A2P05997 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.15■□□□□ 0.66
COL5A2P05997 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.15■□□□□ 0.66
COL5A2P05997 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.15■□□□□ 0.66
COL5A2P05997 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COL5A2P05997 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL5A2P05997 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.15■□□□□ 0.66
COL5A2P05997 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms