Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.74■□□□□ 0.11
ERBB2P04626 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.74■□□□□ 0.11
ERBB2P04626 AC139749.1-202ENST00000617529 3139 ntBASIC15.74■□□□□ 0.11
ERBB2P04626 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.74■□□□□ 0.11
ERBB2P04626 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.74■□□□□ 0.11
ERBB2P04626 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.74■□□□□ 0.11
ERBB2P04626 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.74■□□□□ 0.11
ERBB2P04626 CNN2P8-201ENST00000421872 913 ntBASIC15.74■□□□□ 0.11
ERBB2P04626 KRT43P-201ENST00000434019 910 ntBASIC15.74■□□□□ 0.11
ERBB2P04626 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 AC131206.1-201ENST00000538078 1211 ntBASIC15.74■□□□□ 0.11
ERBB2P04626 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.74■□□□□ 0.11
ERBB2P04626 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.74■□□□□ 0.11
ERBB2P04626 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ERBB2P04626 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.74■□□□□ 0.11
ERBB2P04626 AC138951.2-201ENST00000623455 1161 ntBASIC15.74■□□□□ 0.11
ERBB2P04626 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.74■□□□□ 0.11
ERBB2P04626 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.74■□□□□ 0.11
ERBB2P04626 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ERBB2P04626 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
ERBB2P04626 PDIA3P1-201ENST00000471856 1510 ntBASIC15.73■□□□□ 0.11
ERBB2P04626 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 AC007191.1-201ENST00000623179 2995 ntBASIC15.73■□□□□ 0.11
ERBB2P04626 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
ERBB2P04626 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 AC079776.1-201ENST00000401540 1152 ntBASIC15.73■□□□□ 0.11
ERBB2P04626 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 AC112492.5-201ENST00000421897 457 ntBASIC15.73■□□□□ 0.11
ERBB2P04626 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.73■□□□□ 0.11
ERBB2P04626 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.73■□□□□ 0.11
ERBB2P04626 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.73■□□□□ 0.11
ERBB2P04626 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.73■□□□□ 0.11
ERBB2P04626 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.73■□□□□ 0.11
ERBB2P04626 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.73■□□□□ 0.11
ERBB2P04626 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ERBB2P04626 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ERBB2P04626 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms