Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC11.72□□□□□ -0.53
CUBNO60494 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CUBNO60494 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC11.72□□□□□ -0.53
CUBNO60494 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC11.72□□□□□ -0.53
CUBNO60494 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CUBNO60494 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC11.72□□□□□ -0.53
CUBNO60494 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.72□□□□□ -0.53
CUBNO60494 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CUBNO60494 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CUBNO60494 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC11.71□□□□□ -0.53
CUBNO60494 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.71□□□□□ -0.53
CUBNO60494 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC11.71□□□□□ -0.53
CUBNO60494 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.71□□□□□ -0.53
CUBNO60494 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC11.71□□□□□ -0.53
CUBNO60494 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.71□□□□□ -0.53
CUBNO60494 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC11.71□□□□□ -0.53
CUBNO60494 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC11.71□□□□□ -0.53
CUBNO60494 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.71□□□□□ -0.53
CUBNO60494 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.71□□□□□ -0.53
CUBNO60494 AC063952.3-201ENST00000467756 308 ntBASIC11.71□□□□□ -0.53
CUBNO60494 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC11.71□□□□□ -0.53
CUBNO60494 GOLGA2P7-209ENST00000560408 745 ntBASIC11.71□□□□□ -0.53
CUBNO60494 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.71□□□□□ -0.53
CUBNO60494 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.71□□□□□ -0.53
CUBNO60494 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.71□□□□□ -0.53
CUBNO60494 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CUBNO60494 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CUBNO60494 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 BCAS2P2-201ENST00000425064 674 ntBASIC11.71□□□□□ -0.54
CUBNO60494 ALG3P1-201ENST00000508806 1114 ntBASIC11.71□□□□□ -0.54
CUBNO60494 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
CUBNO60494 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 AC006483.2-201ENST00000609813 515 ntBASIC11.71□□□□□ -0.54
CUBNO60494 AC133540.1-201ENST00000620845 1019 ntBASIC11.71□□□□□ -0.54
CUBNO60494 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.71□□□□□ -0.54
CUBNO60494 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 AC004554.1-201ENST00000422830 1468 ntBASIC11.71□□□□□ -0.54
CUBNO60494 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CUBNO60494 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
CUBNO60494 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
CUBNO60494 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC11.71□□□□□ -0.54
CUBNO60494 USB1-205ENST00000561743 1135 ntTSL 3 BASIC11.71□□□□□ -0.54
CUBNO60494 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.71□□□□□ -0.54
CUBNO60494 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.71□□□□□ -0.54
CUBNO60494 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CUBNO60494 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
CUBNO60494 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CUBNO60494 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.7□□□□□ -0.54
CUBNO60494 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
CUBNO60494 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.7□□□□□ -0.54
CUBNO60494 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CUBNO60494 MIR648-201ENST00000385046 94 ntBASIC11.7□□□□□ -0.54
CUBNO60494 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CUBNO60494 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 NME4-203ENST00000397722 1232 ntTSL 2 BASIC11.7□□□□□ -0.54
CUBNO60494 AC108734.2-201ENST00000420887 1069 ntBASIC11.7□□□□□ -0.54
CUBNO60494 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CUBNO60494 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC11.7□□□□□ -0.54
CUBNO60494 CSNK1G2P1-201ENST00000442675 955 ntBASIC11.7□□□□□ -0.54
CUBNO60494 PPIA-208ENST00000489459 907 ntTSL 2 BASIC11.7□□□□□ -0.54
CUBNO60494 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms