Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC244157.2-201ENST00000616239 1006 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 AL033527.4-201ENST00000641026 673 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 CICP24-201ENST00000605464 2705 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.16■□□□□ 0.02
KDELR3O43731 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 PKD1P5-201ENST00000532415 10291 ntBASIC15.15■□□□□ 0.02
KDELR3O43731 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KDELR3O43731 AL136172.1-201ENST00000598590 1394 ntBASIC15.15■□□□□ 0.02
KDELR3O43731 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KDELR3O43731 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
KDELR3O43731 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.15■□□□□ 0.02
KDELR3O43731 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 AC008825.2-201ENST00000603374 718 ntBASIC15.15■□□□□ 0.02
KDELR3O43731 AP001002.3-201ENST00000623482 206 ntBASIC15.15■□□□□ 0.02
KDELR3O43731 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.15■□□□□ 0.02
KDELR3O43731 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 AC015818.8-201ENST00000587907 1519 ntBASIC15.15■□□□□ 0.02
KDELR3O43731 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.15■□□□□ 0.02
KDELR3O43731 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDELR3O43731 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
KDELR3O43731 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
KDELR3O43731 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
KDELR3O43731 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
KDELR3O43731 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KDELR3O43731 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.14■□□□□ 0.01
KDELR3O43731 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.14■□□□□ 0.01
KDELR3O43731 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.14■□□□□ 0.01
KDELR3O43731 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.14■□□□□ 0.01
KDELR3O43731 AC010141.1-201ENST00000411585 623 ntBASIC15.14■□□□□ 0.01
KDELR3O43731 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.14■□□□□ 0.01
KDELR3O43731 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.14■□□□□ 0.01
KDELR3O43731 PUDPP3-201ENST00000445368 636 ntBASIC15.14■□□□□ 0.01
KDELR3O43731 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.14■□□□□ 0.01
KDELR3O43731 Z93015.1-201ENST00000451718 390 ntBASIC15.14■□□□□ 0.01
KDELR3O43731 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.14■□□□□ 0.01
KDELR3O43731 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KDELR3O43731 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.14■□□□□ 0.01
KDELR3O43731 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.14■□□□□ 0.01
KDELR3O43731 AL136301.1-201ENST00000615830 422 ntBASIC15.14■□□□□ 0.01
KDELR3O43731 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 MTHFR-210ENST00000641407 2387 ntBASIC15.14■□□□□ 0.01
KDELR3O43731 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KDELR3O43731 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.14■□□□□ 0.01
KDELR3O43731 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KDELR3O43731 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDELR3O43731 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.14■□□□□ 0.01
KDELR3O43731 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
KDELR3O43731 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms