Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.37□□□□□ -0.11
CLOCKO15516 GPS2P2-201ENST00000430745 888 ntBASIC14.37□□□□□ -0.11
CLOCKO15516 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.37□□□□□ -0.11
CLOCKO15516 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.37□□□□□ -0.11
CLOCKO15516 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.37□□□□□ -0.11
CLOCKO15516 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.37□□□□□ -0.11
CLOCKO15516 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.37□□□□□ -0.11
CLOCKO15516 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLOCKO15516 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLOCKO15516 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CLOCKO15516 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 AC099521.3-201ENST00000624251 2938 ntBASIC14.36□□□□□ -0.11
CLOCKO15516 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.36□□□□□ -0.11
CLOCKO15516 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLOCKO15516 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLOCKO15516 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.36□□□□□ -0.11
CLOCKO15516 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.36□□□□□ -0.11
CLOCKO15516 INGX-202ENST00000489074 768 ntBASIC14.36□□□□□ -0.11
CLOCKO15516 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.36□□□□□ -0.11
CLOCKO15516 RNA5SP421-201ENST00000516864 134 ntBASIC14.36□□□□□ -0.11
CLOCKO15516 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 ALG1L8P-201ENST00000533887 760 ntBASIC14.36□□□□□ -0.11
CLOCKO15516 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.36□□□□□ -0.11
CLOCKO15516 AL512356.2-201ENST00000546955 174 ntBASIC14.36□□□□□ -0.11
CLOCKO15516 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.36□□□□□ -0.11
CLOCKO15516 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.36□□□□□ -0.11
CLOCKO15516 AC015911.4-201ENST00000588022 1070 ntBASIC14.36□□□□□ -0.11
CLOCKO15516 AL096865.1-201ENST00000606796 927 ntBASIC14.36□□□□□ -0.11
CLOCKO15516 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.36□□□□□ -0.11
CLOCKO15516 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.36□□□□□ -0.11
CLOCKO15516 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLOCKO15516 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.36□□□□□ -0.11
CLOCKO15516 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.36□□□□□ -0.11
CLOCKO15516 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLOCKO15516 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.35□□□□□ -0.11
CLOCKO15516 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLOCKO15516 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 AC007787.1-201ENST00000588095 1583 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 REXO1L4P-201ENST00000605109 1937 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 AP3S2-216ENST00000617003 1561 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms