Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CHKB-CPT1BH3BT56 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
CHKB-CPT1BH3BT56 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CHKB-CPT1BH3BT56 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CHKB-CPT1BH3BT56 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
CHKB-CPT1BH3BT56 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 CICP7-201ENST00000432723 2477 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 KLHDC4-205ENST00000446344 4444 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 PC-214ENST00000628663 1470 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC005622.1-201ENST00000636801 1703 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 HBZP1-201ENST00000354915 429 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AP003733.1-201ENST00000491725 852 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 PPOX-214ENST00000535223 664 ntTSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DUX4L17-201ENST00000557360 1267 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 USF2-205ENST00000594064 1179 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 ILF3-AS1-201ENST00000591501 1983 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AC027369.3-201ENST00000530465 3707 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 KRT8P10-201ENST00000450021 1447 ntBASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CHKB-CPT1BH3BT56 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms