Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 LINC00634-202ENST00000505157 222 ntBASIC20.06■□□□□ 0.8
PHF8Q9UPP1 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 DBP-202ENST00000593500 712 ntTSL 2 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 AC138466.5-201ENST00000624002 808 ntBASIC20.06■□□□□ 0.8
PHF8Q9UPP1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF8Q9UPP1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 PRORSD1P-202ENST00000563365 2154 ntBASIC20.05■□□□□ 0.8
PHF8Q9UPP1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 AC112693.3-201ENST00000624819 1983 ntBASIC20.05■□□□□ 0.8
PHF8Q9UPP1 AC009093.10-201ENST00000641956 1442 ntBASIC20.05■□□□□ 0.8
PHF8Q9UPP1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 GUSBP10-201ENST00000417412 665 ntBASIC20.05■□□□□ 0.8
PHF8Q9UPP1 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 AC084752.1-201ENST00000509766 622 ntBASIC20.05■□□□□ 0.8
PHF8Q9UPP1 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF8Q9UPP1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 AL139008.1-201ENST00000437894 228 ntBASIC20.04■□□□□ 0.8
PHF8Q9UPP1 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 ALG1L13P-202ENST00000519320 584 ntBASIC20.04■□□□□ 0.8
PHF8Q9UPP1 AC006158.1-201ENST00000610661 249 ntBASIC20.04■□□□□ 0.8
PHF8Q9UPP1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 AL391005.1-201ENST00000623953 2435 ntBASIC20.04■□□□□ 0.8
PHF8Q9UPP1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 C18orf15-201ENST00000623680 2534 ntBASIC20.04■□□□□ 0.8
PHF8Q9UPP1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF8Q9UPP1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC20.03■□□□□ 0.8
PHF8Q9UPP1 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms