Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 POM121L14P-201ENST00000406100 1558 ntBASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 CLK3P2-201ENST00000427566 1453 ntBASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX1-2Q9UD57 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX1-2Q9UD57 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 TPM4P1-201ENST00000436100 807 ntBASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AL121956.5-201ENST00000625261 221 ntBASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 BX324167.2-201ENST00000623717 3316 ntBASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX1-2Q9UD57 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX1-2Q9UD57 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX1-2Q9UD57 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX1-2Q9UD57 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX1-2Q9UD57 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX1-2Q9UD57 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX1-2Q9UD57 PCDHB19P-202ENST00000625133 2914 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms