Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 AC015936.2-201ENST00000593177 259 ntBASIC16.38■□□□□ 0.21
GCNT4Q9P109 AC017083.2-201ENST00000608069 979 ntBASIC16.38■□□□□ 0.21
GCNT4Q9P109 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCNT4Q9P109 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GCNT4Q9P109 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 KLF2P2-201ENST00000416807 1039 ntBASIC16.37■□□□□ 0.21
GCNT4Q9P109 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 USP32P1-208ENST00000506594 1164 ntBASIC16.37■□□□□ 0.21
GCNT4Q9P109 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 AL512343.1-201ENST00000605837 169 ntBASIC16.37■□□□□ 0.21
GCNT4Q9P109 AC005252.2-201ENST00000624630 1141 ntBASIC16.37■□□□□ 0.21
GCNT4Q9P109 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCNT4Q9P109 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.37■□□□□ 0.21
GCNT4Q9P109 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 AP001267.2-201ENST00000532619 2086 ntBASIC16.36■□□□□ 0.21
GCNT4Q9P109 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
GCNT4Q9P109 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCNT4Q9P109 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms