Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE2Q9NRR3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC093525.8-201ENST00000624099 1342 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AL158070.2-201ENST00000623713 1621 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 UPF3AP3-201ENST00000420996 769 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 CNN2P11-201ENST00000429351 262 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 HLA-J-203ENST00000494367 1087 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC027369.6-201ENST00000525520 931 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC044860.1-202ENST00000559481 777 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 AC092337.1-201ENST00000568699 1129 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE2Q9NRR3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms