Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 TPT1P11-201ENST00000458482 498 ntBASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.96□□□□□ -0.17
POLR2J2Q9GZM3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 AC018665.1-201ENST00000622927 1362 ntBASIC13.96□□□□□ -0.18
POLR2J2Q9GZM3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 AL353779.1-201ENST00000434793 351 ntBASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 RPL13AP25-201ENST00000484130 612 ntBASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 AC036164.1-201ENST00000570544 333 ntBASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms