Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 AP003398.1-201ENST00000531124 318 ntBASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 RN7SL258P-201ENST00000478664 300 ntBASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 AC004066.1-201ENST00000502488 802 ntBASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 AC022616.1-201ENST00000518688 554 ntBASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 AC009779.1-201ENST00000551138 283 ntBASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.52■□□□□ 0.24
UBE2OQ9C0C9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 AC104640.1-201ENST00000562617 2109 ntBASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 AL158070.2-201ENST00000623713 1621 ntBASIC16.52■□□□□ 0.23
UBE2OQ9C0C9 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 Z69890.1-201ENST00000382990 339 ntBASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 AC008723.1-201ENST00000506922 207 ntBASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 SAMD11P1-201ENST00000571429 661 ntBASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 AC138466.3-201ENST00000619983 221 ntBASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.51■□□□□ 0.23
UBE2OQ9C0C9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms