Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 AC112492.5-201ENST00000421897 457 ntBASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 RN7SL48P-201ENST00000579283 293 ntBASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.18■□□□□ 0.02
LPCAT1Q8NF37 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 AC099063.4-201ENST00000641099 1602 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 TPM3P8-201ENST00000330554 643 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 FAM197Y7-201ENST00000432892 766 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 KRT90P-201ENST00000549264 1064 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 RAB43P1-201ENST00000561790 589 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 AL162274.1-201ENST00000617191 1098 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 CICP23-201ENST00000605013 2741 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 AC018529.2-202ENST00000611482 3087 ntBASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPCAT1Q8NF37 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.16■□□□□ 0.02
LPCAT1Q8NF37 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LPCAT1Q8NF37 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms