Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.31□□□□□ -0.28
DNAAF1Q8NEP3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 AC007787.1-201ENST00000588095 1583 ntBASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 AC074044.1-201ENST00000609673 707 ntBASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 MIR193BHG-211ENST00000641433 5365 ntBASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
DNAAF1Q8NEP3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms