Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
HIPK4Q8NE63 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 TCAF1P1-201ENST00000414990 2232 ntBASIC14.7□□□□□ -0.06
HIPK4Q8NE63 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 MCCD1P2-201ENST00000423228 335 ntBASIC14.7□□□□□ -0.06
HIPK4Q8NE63 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 SLC25A39P2-201ENST00000537614 270 ntBASIC14.7□□□□□ -0.06
HIPK4Q8NE63 RARRES2P9-201ENST00000565168 469 ntBASIC14.7□□□□□ -0.06
HIPK4Q8NE63 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIPK4Q8NE63 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 AZGP1P1-201ENST00000411909 902 ntBASIC14.69□□□□□ -0.06
HIPK4Q8NE63 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 AC055717.3-201ENST00000622967 595 ntBASIC14.69□□□□□ -0.06
HIPK4Q8NE63 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIPK4Q8NE63 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HIPK4Q8NE63 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms