Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AC027796.2-201ENST00000575326 344 ntBASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AC009118.2-201ENST00000613275 655 ntBASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 AL390755.1-201ENST00000623716 2027 ntBASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 GRK6P1-201ENST00000400595 1711 ntBASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 SLC7A15P-201ENST00000424028 1363 ntBASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 LILRP1-201ENST00000444199 1370 ntBASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF439Q8NDP4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 AL138799.1-201ENST00000448213 1675 ntBASIC12.52□□□□□ -0.4
ZNF439Q8NDP4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 MIR770-201ENST00000390219 98 ntBASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 AC055876.2-201ENST00000531834 546 ntBASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF439Q8NDP4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms