Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 AC026316.1-201ENST00000398900 414 ntBASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 RPL18P13-201ENST00000478088 569 ntBASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 AC019193.1-201ENST00000506678 823 ntBASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 MIR4783-201ENST00000580343 82 ntBASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SYNPOQ8N3V7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 AC009779.1-201ENST00000551138 283 ntBASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 AL160314.3-201ENST00000556041 767 ntBASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 TMBIM7P-203ENST00000641617 1718 ntBASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 AC092850.2-201ENST00000623821 2697 ntBASIC15.2■□□□□ 0.02
SYNPOQ8N3V7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms