Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AL136379.1-201ENST00000623471 2642 ntBASIC15.29■□□□□ 0.04
CHPFQ8IZ52 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 GHSR-202ENST00000427970 912 ntBASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 SERPINA13P-202ENST00000478994 924 ntBASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC044849.1-201ENST00000519737 1188 ntBASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC005730.2-201ENST00000564549 1184 ntBASIC15.29■□□□□ 0.04
CHPFQ8IZ52 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC138649.2-201ENST00000615886 705 ntBASIC15.29■□□□□ 0.04
CHPFQ8IZ52 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 REXO1L4P-201ENST00000605109 1937 ntBASIC15.29■□□□□ 0.04
CHPFQ8IZ52 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHPFQ8IZ52 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 SSR4P1-203ENST00000599569 2260 ntBASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AC012508.2-201ENST00000567613 1472 ntBASIC15.28■□□□□ 0.04
CHPFQ8IZ52 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AL354877.1-201ENST00000424412 413 ntBASIC15.28■□□□□ 0.04
CHPFQ8IZ52 NKAIN1P1-201ENST00000435754 582 ntBASIC15.28■□□□□ 0.04
CHPFQ8IZ52 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHPFQ8IZ52 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms