Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 TMEM198B-204ENST00000484016 896 ntBASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 GAPDHP40-201ENST00000505218 1006 ntBASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AC009093.7-201ENST00000623853 1223 ntBASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 AC138969.2-201ENST00000532739 9932 ntBASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRTM1Q86UE6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
LRRTM1Q86UE6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRRTM1Q86UE6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LRRTM1Q86UE6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
LRRTM1Q86UE6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRTM1Q86UE6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms