Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 TMBIM7P-203ENST00000641617 1718 ntBASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 AL672207.1-201ENST00000328462 1570 ntBASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 NHP2-202ENST00000314397 599 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 RNA5SP359-201ENST00000364838 113 ntBASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 GCOM2-201ENST00000509133 1104 ntBASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 FES-203ENST00000394302 2133 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PYY2-201ENST00000315776 282 ntBASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 AL109954.1-202ENST00000564051 2148 ntBASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 AC004554.1-201ENST00000422830 1468 ntBASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 HNRNPA1P27-201ENST00000412087 955 ntBASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 AC106827.1-201ENST00000366454 431 ntBASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms