Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AP3S2-216ENST00000617003 1561 ntBASIC16■□□□□ 0.15
CCNI2Q6ZMN8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AC012508.2-201ENST00000567613 1472 ntBASIC16■□□□□ 0.15
CCNI2Q6ZMN8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AC105233.2-201ENST00000523697 349 ntBASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AF228730.5-201ENST00000530288 346 ntBASIC16■□□□□ 0.15
CCNI2Q6ZMN8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 COL6A4P2-202ENST00000504443 2753 ntBASIC16■□□□□ 0.15
CCNI2Q6ZMN8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNI2Q6ZMN8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 AC027612.1-201ENST00000445234 2395 ntBASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 AC087499.6-201ENST00000411576 835 ntBASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 AZGP1P1-201ENST00000411909 902 ntBASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 AC142381.1-201ENST00000426099 345 ntBASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 DFFBP1-201ENST00000433250 979 ntBASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCNI2Q6ZMN8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms