Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 GCSHP3-201ENST00000431120 391 ntBASIC18.51■□□□□ 0.55
RC3H1Q5TC82 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 AC006158.1-201ENST00000610661 249 ntBASIC18.51■□□□□ 0.55
RC3H1Q5TC82 AC244250.3-201ENST00000620749 366 ntBASIC18.51■□□□□ 0.55
RC3H1Q5TC82 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.51■□□□□ 0.55
RC3H1Q5TC82 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 AL391005.1-201ENST00000623953 2435 ntBASIC18.5■□□□□ 0.55
RC3H1Q5TC82 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 RPL35P9-201ENST00000446059 350 ntBASIC18.5■□□□□ 0.55
RC3H1Q5TC82 AC024293.1-201ENST00000467930 498 ntBASIC18.5■□□□□ 0.55
RC3H1Q5TC82 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 AC140113.1-201ENST00000603467 169 ntBASIC18.5■□□□□ 0.55
RC3H1Q5TC82 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RC3H1Q5TC82 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 SSR4P1-203ENST00000599569 2260 ntBASIC18.49■□□□□ 0.55
RC3H1Q5TC82 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 ERP29P1-201ENST00000442902 706 ntBASIC18.49■□□□□ 0.55
RC3H1Q5TC82 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 RN7SL596P-201ENST00000582123 288 ntBASIC18.49■□□□□ 0.55
RC3H1Q5TC82 MIR4472-1-201ENST00000584349 80 ntBASIC18.49■□□□□ 0.55
RC3H1Q5TC82 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RC3H1Q5TC82 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms