Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 AC114812.1-204ENST00000449669 728 ntBASIC14.65□□□□□ -0.06
YBX1P67809 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.65□□□□□ -0.06
YBX1P67809 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
YBX1P67809 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
YBX1P67809 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
YBX1P67809 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.65□□□□□ -0.06
YBX1P67809 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.65□□□□□ -0.06
YBX1P67809 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.65□□□□□ -0.06
YBX1P67809 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.65□□□□□ -0.06
YBX1P67809 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.65□□□□□ -0.06
YBX1P67809 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
YBX1P67809 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.65□□□□□ -0.07
YBX1P67809 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
YBX1P67809 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
YBX1P67809 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.64□□□□□ -0.07
YBX1P67809 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
YBX1P67809 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
YBX1P67809 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
YBX1P67809 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 AL645937.2-201ENST00000396808 931 ntBASIC14.64□□□□□ -0.07
YBX1P67809 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.64□□□□□ -0.07
YBX1P67809 ACTBP8-201ENST00000403258 1108 ntBASIC14.64□□□□□ -0.07
YBX1P67809 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.64□□□□□ -0.07
YBX1P67809 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.64□□□□□ -0.07
YBX1P67809 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.64□□□□□ -0.07
YBX1P67809 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.64□□□□□ -0.07
YBX1P67809 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.64□□□□□ -0.07
YBX1P67809 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
YBX1P67809 AC233724.13-201ENST00000598383 410 ntBASIC14.64□□□□□ -0.07
YBX1P67809 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.64□□□□□ -0.07
YBX1P67809 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.64□□□□□ -0.07
YBX1P67809 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.64□□□□□ -0.07
YBX1P67809 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 AL138709.1-201ENST00000614840 1693 ntBASIC14.64□□□□□ -0.07
YBX1P67809 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 AC010327.5-201ENST00000586923 3061 ntBASIC14.64□□□□□ -0.07
YBX1P67809 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.64□□□□□ -0.07
YBX1P67809 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
YBX1P67809 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
YBX1P67809 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 NFIC-211ENST00000641145 8399 ntBASIC14.63□□□□□ -0.07
YBX1P67809 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
YBX1P67809 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
YBX1P67809 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms