Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 KRT8P12-202ENST00000472924 1397 ntBASIC13.72□□□□□ -0.21
CXCR4P61073 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.72□□□□□ -0.21
CXCR4P61073 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CXCR4P61073 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CXCR4P61073 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 AC114271.1-201ENST00000612689 2813 ntBASIC13.72□□□□□ -0.21
CXCR4P61073 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CXCR4P61073 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 MTND6P24-201ENST00000440466 518 ntBASIC13.72□□□□□ -0.21
CXCR4P61073 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCR4P61073 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 KRT18P58-201ENST00000527480 1120 ntBASIC13.72□□□□□ -0.21
CXCR4P61073 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCR4P61073 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCR4P61073 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CXCR4P61073 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCR4P61073 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.72□□□□□ -0.21
CXCR4P61073 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 AL133215.2-201ENST00000609242 977 ntBASIC13.72□□□□□ -0.21
CXCR4P61073 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCR4P61073 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCR4P61073 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CXCR4P61073 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CXCR4P61073 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CXCR4P61073 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.71□□□□□ -0.21
CXCR4P61073 AC068760.1-201ENST00000493579 1953 ntBASIC13.71□□□□□ -0.21
CXCR4P61073 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCR4P61073 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CXCR4P61073 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 AL627223.1-201ENST00000416693 442 ntBASIC13.71□□□□□ -0.21
CXCR4P61073 RBPMS2P1-201ENST00000437762 623 ntBASIC13.71□□□□□ -0.21
CXCR4P61073 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CXCR4P61073 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.71□□□□□ -0.21
CXCR4P61073 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCR4P61073 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CXCR4P61073 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 POLD2P1-201ENST00000511220 997 ntBASIC13.71□□□□□ -0.21
CXCR4P61073 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.71□□□□□ -0.21
CXCR4P61073 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CXCR4P61073 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCR4P61073 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.71□□□□□ -0.21
CXCR4P61073 AC007967.4-201ENST00000614700 386 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms