Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CLDN6P56747 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 RN7SKP214-201ENST00000364208 315 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLDN6P56747 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN6P56747 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.39□□□□□ -0.11
CLDN6P56747 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN6P56747 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN6P56747 AC087045.2-201ENST00000606279 1003 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 AC092171.5-201ENST00000608012 942 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 AC103691.2-201ENST00000618824 433 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN6P56747 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 AP000593.2-201ENST00000542775 1433 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 AC103702.1-201ENST00000548801 2630 ntBASIC14.39□□□□□ -0.11
CLDN6P56747 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN6P56747 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLDN6P56747 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN6P56747 SHC1P1-201ENST00000425230 1745 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN6P56747 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN6P56747 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLDN6P56747 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLDN6P56747 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CLDN6P56747 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
CLDN6P56747 AC078991.1-201ENST00000437297 610 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 VDAC1P1-201ENST00000439229 848 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN6P56747 AC006335.1-201ENST00000445200 547 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN6P56747 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN6P56747 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN6P56747 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CLDN6P56747 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN6P56747 MIR6842-201ENST00000612539 65 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 COX6A1P2-201ENST00000620597 330 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 AC009084.3-201ENST00000623356 437 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 NAP1L6-202ENST00000641404 1222 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN6P56747 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.38□□□□□ -0.11
CLDN6P56747 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN6P56747 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN6P56747 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms